Commonly used
Hs
Human
Homo sapiens
GRCh38
Mm
Mouse
Mus musculus
GRCm39
Rn
Rat
Rattus norvegicus
GRCr8
Dr
Zebrafish
Danio rerio
GRCz11
Dm
Fruit fly
Drosophila melanogaster
BDGP6
Ce
Roundworm
Caenorhabditis elegans
WBcel235
Sc
Baker's yeast
Saccharomyces cerevisiae
R64-1-1
Eco
E. coli
Escherichia coli K-12
ASM584v2
At
Thale cress
Arabidopsis thaliana
TAIR10
Xt
Tropical clawed frog
Xenopus tropicalis
UCB_Xtro_10.0
Mammals
Aju
Cheetah
Acinonyx jubatus
VMU_Ajub_asm_v1.0
Ame
Giant panda
Ailuropoda melanoleuca
ASM200744v2
Bmu
Blue whale
Balaenoptera musculus
mBalMus1.v2
Bbi
American bison
Bison bison bison
Bison_UMD1.0
Bt
Cattle
Bos taurus
ARS-UCD2.0
Cj
Common marmoset
Callithrix jacchus
mCalJac1.pat.X
Cdr
Dromedary camel
Camelus dromedarius
CamDro2
Cf
Dog
Canis lupus familiaris
ROS_Cfam_1.0
Ch
Goat
Capra hircus
ARS1
Csy
Philippine tarsier
Carlito syrichta
Tarsius_syrichta-2.0.1
Cp
Guinea pig
Cavia porcellus
Cavpor3.0
Csi
White rhinoceros
Ceratotherium simum simum
ASM5780239v1
Chy
Yarkand deer
Cervus hanglu yarkandensis
CEY_v1
Cs
African green monkey
Chlorocebus sabaeus
ChlSab1.1
Cho
Hoffmann's two-fingered sloth
Choloepus hoffmanni
choHof1
Cg
Chinese hamster (CHO)
Cricetulus griseus
CriGri-PICRH-1.0
Dn
Nine-banded armadillo
Dasypus novemcinctus
Dasnov3.0
Dle
Beluga whale
Delphinapterus leucas
ASM228892v3
Elu
Northern sea otter
Enhydra lutris kenyoni
ASM228890v2
Ea
Donkey
Equus asinus
ASM1607732v2
Eca
Horse
Equus caballus
EquCab3.0
Eeu
European hedgehog
Erinaceus europaeus
eriEur1
Fc
Cat
Felis catus
Fca126_mat1.0
Gti
Giraffe
Giraffa tippelskirchi
T2T-mGirTip1v1.2.pri
Ggo
Gorilla
Gorilla gorilla
gorGor4
Hg
Naked mole-rat
Heterocephalus glaber
Naked_mole-rat_maternal
Itr
Thirteen-lined ground squirrel
Ictidomys tridecemlineatus
SpeTri2.0
Lwe
Weddell seal
Leptonychotes weddellii
ASM5417740v2
Laf
African elephant
Loxodonta africana
Loxafr3.0
Mfa
Cynomolgus macaque
Macaca fascicularis
Macaca_fascicularis_6.0
Mmu
Rhesus macaque
Macaca mulatta
Mmul_10
Mau
Golden hamster
Mesocricetus auratus
MesAur1.0
Mic
Gray mouse lemur
Microcebus murinus
Mmur_3.0
Moc
Prairie vole
Microtus ochrogaster
MicOch1.0
Md
Grey short-tailed opossum
Monodelphis domestica
ASM229v1
Mon
Narwhal
Monodon monoceros
NGI_Narwhal_1
Mmo
Siberian musk deer
Moschus moschiferus
MosMos_v2_BIUU_UCD
Mpf
Ferret
Mustela putorius furo
MusPutFur1.0
Ml
Little brown bat
Myotis lucifugus
Myoluc2.0
Nl
Northern white-cheeked gibbon
Nomascus leucogenys
Nleu_3.0
Neu
Tammar wallaby
Notamacropus eugenii
Meug_1.0
Op
American pika
Ochotona princeps
OchPri2.0-Ens
Ovi
White-tailed deer
Odocoileus virginianus
Ovbor_1.2
Oan
Platypus
Ornithorhynchus anatinus
mOrnAna1.p.v1
Oc
Rabbit
Oryctolagus cuniculus
OryCun2.0
Oa
Sheep
Ovis aries
ARS-UI_Ramb_v3.0
Ppa
Bonobo
Pan paniscus
panpan1.1
Ple
Lion
Panthera leo
PanLeo1.0
Ppd
Leopard
Panthera pardus
PanPar1.0
Pta
Tiger
Panthera tigris altaica
PanTig1.0
Ptr
Chimpanzee
Pan troglodytes
Pan_tro_3.0
Pan
Olive baboon
Papio anubis
Panubis1.0
Pci
Koala
Phascolarctos cinereus
phaCin_unsw_v4.1
Pca
Sperm whale
Physeter catodon
ASM283717v2
Pab
Sumatran orangutan
Pongo abelii
Susie_PABv2
Pc
Rock hyrax
Procavia capensis
proCap1
Psi
Greater bamboo lemur
Prolemur simus
Prosim_1.0
Pvam
Large flying fox
Pteropus vampyrus
pteVam1
Rta
Reindeer
Rangifer tarandus platyrhynchus
mRanTar1.h1.1
Rf
Greater horseshoe bat
Rhinolophus ferrumequinum
mRhiFer1_v1.p
Sha
Tasmanian devil
Sarcophilus harrisii
mSarHar1.11
Ss
Pig
Sus scrofa
Sscrofa11.1
Tbe
Northern tree shrew
Tupaia belangeri
tupBel1
Ttr
Bottlenose dolphin
Tursiops truncatus
mTurTru1.mat.Y
Uam
American black bear
Ursus americanus
ASM334442v1
Uma
Polar bear
Ursus maritimus
UrsMar_1.0
Vp
Alpaca
Vicugna pacos
vicPac1
Vur
Common wombat
Vombatus ursinus
bare-nosed_wombat_genome_assembly
Vvu
Red fox
Vulpes vulpes
VulVul2.2
Birds
Apl
Mallard duck
Anas platyrhynchos
ASM874695v1
Afo
Emperor penguin
Aptenodytes forsteri
ASM69914v1
Ach
Golden eagle
Aquila chrysaetos chrysaetos
bAquChr1.2
Cli
Rock pigeon
Columba livia
bColLiv1.pat.W.v2
Cmo
New Caledonian crow
Corvus moneduloides
bCorMon1.pri
Cja
Japanese quail
Coturnix japonica
Coturnix_japonica_2.0
Fa
Collared flycatcher
Ficedula albicollis
FicAlb1.5
Gg
Chicken
Gallus gallus
GRCg7b
Gfo
Medium ground finch
Geospiza fortis
GeoFor_1.0
Mga
Turkey
Meleagris gallopavo
Turkey_5.1
Mun
Budgerigar
Melopsittacus undulatus
bMelUnd1.mat.Z
Scan
Common canary
Serinus canaria
SCA1
Shb
Kakapo
Strigops habroptila
bStrHab1_v1.p
Sca
African ostrich
Struthio camelus australis
ASM69896v1
Tgu
Zebra finch
Taeniopygia guttata
bTaeGut1_v1.p
Tal
Barn owl
Tyto alba
T.alba_DEE_v4.0
Fish
Amex
Mexican tetra
Astyanax mexicanus
Astyanax_mexicanus-2.0
Bsp
Siamese fighting fish
Betta splendens
fBetSpl5.2
Cmi
Elephant shark
Callorhinchus milii
Callorhinchus_milii-6.1.3
Ca
Goldfish
Carassius auratus
ASM336829v1
Cc
Common carp
Cyprinus carpio carpio
Cypcar_WagV4.0
Ee
Electric eel
Electrophorus electricus
fEleEle1.pri
Ebu
Inshore hagfish
Eptatretus burgeri
Eburgeri_3.2
Ec
Reedfish
Erpetoichthys calabaricus
fErpCal1.1
Gmo
Atlantic cod
Gadus morhua
gadMor3.0
Ga
Three-spined stickleback
Gasterosteus aculeatus
GAculeatus_UGA_version5
Hco
Tiger tail seahorse
Hippocampus comes
H_comes_QL1_v1
Lch
Coelacanth
Latimeria chalumnae
LatCha1
Loc
Spotted gar
Lepisosteus oculatus
LepOcu1
Nf
Turquoise killifish
Nothobranchius furzeri
Nfu_20140520
Om
Rainbow trout
Oncorhynchus mykiss
USDA_OmykA_1.1
On
Nile tilapia
Oreochromis niloticus
UMD_NMBU
Ol
Medaka
Oryzias latipes
ASM223467v1
Pma
Sea lamprey
Petromyzon marinus
Pmarinus_7.0
Pre
Guppy
Poecilia reticulata
Guppy_female_1.0_MT
Ssa
Atlantic salmon
Salmo salar
Ssal_v3.1
Sf
Asian bonytongue
Scleropages formosus
fSclFor1.1
Tru
Fugu
Takifugu rubripes
fTakRub1.2
Amphibians
Amx
Axolotl
Ambystoma mexicanum
UKY_AmexF1_1
Gse
Gaboon caecilian
Geotrypetes seraphini
aGeoSer1.2
Ll
Leishan spiny toad
Leptobrachium leishanense
ASM966780v1
Pwa
Iberian ribbed newt
Pleurodeles waltl
aPleWal1.hap1
Xl
African clawed frog
Xenopus laevis
Xenopus_laevis_v10.1
Reptiles
Ami
American alligator
Alligator mississippiensis
rAllMis1
Aca
Green anole
Anolis carolinensis
AnoCar2.0v2
Cpi
Painted turtle
Chrysemys picta bellii
Chrysemys_picta_bellii-3.0.3
Cpo
Australian saltwater crocodile
Crocodylus porosus
CroPor_comp1
Nna
Indian cobra
Naja naja
Nana_v5
Ps
Chinese softshell turtle
Pelodiscus sinensis
PelSin_1.0
Pm
Common wall lizard
Podarcis muralis
PodMur_1.0
Pvi
Central bearded dragon
Pogona vitticeps
PviZW2.1
Ptex
Eastern brown snake
Pseudonaja textilis
EBS10Xv2-PRI
Spt
Tuatara
Sphenodon punctatus
ASM311381v1
Vko
Komodo dragon
Varanus komodoensis
ASM479886v1
Invertebrates
Apc
Crown-of-thorns starfish
Acanthaster planci
OKI_Apl_1.0
Acm
Stony coral
Acropora millepora
Amil_v2.1
Api
Pea aphid
Acyrthosiphon pisum
pea_aphid_22Mar2018_4r6ur_v2
Aa
Yellow fever mosquito
Aedes aegypti
AaegL5
Aal
Asian tiger mosquito
Aedes albopictus
GCA035046485v1
Aqu
Demosponge
Amphimedon queenslandica
v1.1
Ag
Malaria mosquito
Anopheles gambiae
AgamP4
As
Asian malaria mosquito
Anopheles stephensi
AsteI2
Am
Honey bee
Apis mellifera
Amel_HAv3.1
Ac
California sea hare
Aplysia californica
AplCal3.0
Aru
European starfish
Asterias rubens
eAstRub1.3
Ace
Leaf-cutter ant
Atta cephalotes
Attacep1.0
Bte
Buff-tailed bumblebee
Bombus terrestris
iyBomTerr1.2
Bmo
Silkworm
Bombyx mori
ASM3026992v2
Bma
Filarial worm
Brugia malayi
Bmal-4.0
Cb
Nematode (briggsae)
Caenorhabditis briggsae
CB4
Cfl
Florida carpenter ant
Camponotus floridanus
Cflo_v7.5
Ci
Sea vase
Ciona intestinalis
ASM1832782v2
Cq
Southern house mosquito
Culex quinquefasciatus
VPISU_Cqui_1.0
Dpl
Monarch butterfly
Danaus plexippus
MEX_DaPlex
Dma
Water flea
Daphnia magna
ASM2063170v1.1
Dp
Common water flea
Daphnia pulex
ASM2113471v1
Dsi
Fruit fly (simulans)
Drosophila simulans
Prin_Dsim_3.1
Esi
Chinese mitten crab
Eriocheir sinensis
ASM2467909v1
Ham
American lobster
Homarus americanus
GMGI_Hamer_2.0
Hga
European lobster
Homarus gammarus
Homarus_gammarus
Hyd
Hydra
Hydra vulgaris
HydraT2T_AEP
He
Water bear
Hypsibius exemplaris
nHd_3.1
Iel
Blue-tailed damselfly
Ischnura elegans
ioIscEleg1.1
Isc
Black-legged tick
Ixodes scapularis
ASM1692078v2
Lpo
Atlantic horseshoe crab
Limulus polyphemus
Limulus_polyphemus_2.1.2
Mdom
House fly
Musca domestica
Musca_domestica.polishedcontigs.V.1.1
Nv
Starlet sea anemone
Nematostella vectensis
jaNemVect1.1
Nlu
Brown planthopper
Nilaparvata lugens
ASM1435652v1
Obi
California two-spot octopus
Octopus bimaculoides
ASM119413v2
Pte
Common house spider
Parasteatoda tepidariorum
CAS_Ptep_4.0
Pmi
Bat star
Patiria miniata
Pmin_3.0
Pmo
Black tiger shrimp
Penaeus monodon
NSTDA_Pmon_1
Pva
Pacific white shrimp
Penaeus vannamei
ASM4276789v1
Ppy
Firefly
Photinus pyralis
Ppyr1.3
Por
Swimming crab
Portunus trituberculatus
ASM1759143v1
Rv
Water bear (Ramazzottius)
Ramazzottius varieornatus
Rvar_4.0
Sgr
Desert locust
Schistocerca gregaria
iqSchGreg1.2
Sma
Blood fluke
Schistosoma mansoni
Smansoni_v7
Sme
Planarian
Schmidtea mediterranea
schMedS3h2
Spu
Purple sea urchin
Strongylocentrotus purpuratus
Spur_5.0
Tu
Two-spotted spider mite
Tetranychus urticae
ASM23943v1
Tc
Red flour beetle
Tribolium castaneum
icTriCast1.1
Zn
Nevada dampwood termite
Zootermopsis nevadensis
ZooNev1.0
Plants
Atr
Amborella
Amborella trichopoda
AMTR1.0
Al
Lyrate rockcress
Arabidopsis lyrata
v.1.0
Bv
Sugar beet
Beta vulgaris
RefBeet-1.2.2
Bd
Purple false brome
Brachypodium distachyon
v3.0
Bn
Canola
Brassica napus
AST_PRJEB5043_v1
Bo
Cabbage
Brassica oleracea
BOL
Br
Field mustard
Brassica rapa
Brapa_1.0
Can
Pepper
Capsicum annuum
ASM51225v2
Cbr
Stonewort
Chara braunii
Cbr_1.0
Cr
Green alga
Chlamydomonas reinhardtii
v5.5
Cca
Robusta coffee
Coffea canephora
AUK_PRJEB4211_v1
Csa
Cucumber
Cucumis sativus
ASM407v2
Gm
Soybean
Glycine max
Glycine_max_v2.1
Gh
Cotton
Gossypium hirsutum
TM-1 v2.1
Ha
Sunflower
Helianthus annuus
HanXRQr2.0-SUNRISE
Hv
Barley
Hordeum vulgare
MorexV3
Mdo
Apple
Malus domestica
ASM211411v1
Me
Cassava
Manihot esculenta
M.esculenta_v8
Mp
Common liverwort
Marchantia polymorpha
MpTak1_v7.1
Mt
Barrel medic
Medicago truncatula
MtrunA17r5.0
Ma
Banana
Musa acuminata
Musa_acuminata_v2
Os
Rice
Oryza sativa
IRGSP-1.0
Pp
Spreading earthmoss
Physcomitrium patens
Phypa V3
Psa
Pea
Pisum sativum
Pisum_sativum_v1a
Pt
Black cottonwood
Populus trichocarpa
Pop_tri_v4
Sm
Spikemoss
Selaginella moellendorffii
v1.0
Si
Foxtail millet
Setaria italica
v2.0
Sv
Green foxtail
Setaria viridis
v2.0
Sl
Tomato
Solanum lycopersicum
SL4.0
St
Potato
Solanum tuberosum
SolTub_3.0
Sb
Sorghum
Sorghum bicolor
NCBIv3
Tca
Cacao
Theobroma cacao
Theobroma_cacao_20110822
Ta
Bread wheat
Triticum aestivum
IWGSC
Vv
Grape
Vitis vinifera
ASM3070453v1
Zm
Maize
Zea mays
B73 NAM-5.0
Fungi
Afu
A. fumigatus
Aspergillus fumigatus Af293
GCA000002655v1
Ani
A. nidulans
Aspergillus nidulans
ASM1142v1
An
A. niger
Aspergillus niger
ASM285v2
Bci
Grey mould
Botrytis cinerea
ASM83294v1
Cal
C. albicans
Candida albicans SC5314
Assembly 22
Cau
C. auris
Candidozyma auris
GCA002759435v2
Cn
C. neoformans
Cryptococcus neoformans H99
CNA3
Fg
Fusarium
Fusarium graminearum
GCA900044135v1
Hca
Histoplasma
Histoplasma ohiense
GCA000170615v1
Kph
Pichia pastoris
Komagataella phaffii
ASM2700v1
Mor
Rice blast fungus
Magnaporthe oryzae
GCA900474545v2
Nc
Red bread mould
Neurospora crassa
NC12
Pg
Wheat stem rust
Puccinia graminis
ASM14992v1
Sp
Fission yeast
Schizosaccharomyces pombe
ASM294v2
Ssc
White mould
Sclerotinia sclerotiorum
ASM14694v1
Tr
Trichoderma
Trichoderma reesei
GCA000167675v2
Zt
Septoria leaf blotch
Zymoseptoria tritici
MG2
Protists
Bbo
Cattle babesiosis parasite
Babesia bovis
GCA000165395v2
Cpa
Cryptosporidium
Cryptosporidium parvum
ASM16534v1
Dd
Slime mould
Dictyostelium discoideum
dicty_2.7
Ehu
Coccolithophore
Emiliania huxleyi
Emiliana huxleyi CCMP1516 main genome assembly v1.0
Ehi
Entamoeba
Entamoeba histolytica
JCVI-ESG2-1.0
Gi
Giardia
Giardia intestinalis
GCA000002435v2
Lm
Leishmania
Leishmania major Friedlin
ASM272v2
Ptet
Paramecium
Paramecium tetraurelia
ASM16542v1
Ptri
Diatom
Phaeodactylum tricornutum
ASM15095v2
Pin
Potato blight
Phytophthora infestans
ASM14294v1
Pf
Malaria parasite
Plasmodium falciparum
GCA000002765v3
Pv
Malaria parasite (vivax)
Plasmodium vivax
GCA900093555v2
Tth
Tetrahymena
Tetrahymena thermophila
JCVI-TTA1-2.2
Tg
Toxoplasma
Toxoplasma gondii ME49
TGA4
Tv
Trichomonas
Trichomonas vaginalis
ASM282v3
Tb
Sleeping sickness parasite
Trypanosoma brucei
GCA000002445v1
Bacteria
Ab
A. baumannii
Acinetobacter baumannii ATCC 17978
ASM1542v1
Atu
Agrobacterium
Agrobacterium fabrum
ASM9202v1
Bs
B. subtilis
Bacillus subtilis 168
ASM904v1
Bb
Lyme disease bacterium
Borreliella burgdorferi
ASM868v2
Cje
Campylobacter
Campylobacter jejuni
ASM908v1
Ccr
Caulobacter
Caulobacter crescentus
ASM2200v1
Ct
Chlamydia
Chlamydia trachomatis
ASM872v1
Cd
C. difficile
Clostridioides difficile 630
ASM920v2
Dra
Deinococcus
Deinococcus radiodurans
ASM856v1
Efm
E. faecium
Enterococcus faecium Aus0004
ASM25094v2
Hp
H. pylori
Helicobacter pylori 26695
ASM852v1
Kp
K. pneumoniae
Klebsiella pneumoniae HS11286
ASM24018v2
Lp
Legionella
Legionella pneumophila
ASM848v1
Lmo
Listeria
Listeria monocytogenes
ASM19603v1
Mtb
M. tuberculosis
Mycobacterium tuberculosis H37Rv
ASM19595v2
Ng
N. gonorrhoeae
Neisseria gonorrhoeae FA 1090
ASM684v1
Pa
P. aeruginosa
Pseudomonas aeruginosa PAO1
ASM676v1
Sty
Salmonella
Salmonella Typhimurium LT2
ASM694v2
Sau
S. aureus
Staphylococcus aureus NCTC 8325
ASM1342v1
Spn
S. pneumoniae
Streptococcus pneumoniae TIGR4
ASM688v1
Spy
Group A strep
Streptococcus pyogenes
ASM678v2
Sco
S. coelicolor
Streptomyces coelicolor A3(2)
ASM20383v1
Syn
Synechocystis
Synechocystis sp. PCC 6803
ASM972v1
Tpa
Syphilis bacterium
Treponema pallidum
ASM860v1
Vc
Cholera bacterium
Vibrio cholerae
ASM674v1
Archaea
Aful
Archaeoglobus
Archaeoglobus fulgidus
ASM866v1
Hsal
Halobacterium
Halobacterium salinarum
ASM680v1
Hvo
Haloferax
Haloferax volcanii
ASM2568v1
Mj
Methanocaldococcus
Methanocaldococcus jannaschii
ASM9166v1
Mac
Methanosarcina
Methanosarcina acetivorans
ASM734v1
Nma
Nitrosopumilus
Nitrosopumilus maritimus
ASM1846v1
Pfu
Pyrococcus
Pyrococcus furiosus
ASM730v1
Sso
Sulfolobus
Saccharolobus solfataricus
ASM700v1
Viruses
DENV
Dengue virus
Dengue virus 2
ViralProj20183
Lam
Phage lambda
Escherichia phage lambda
ViralProj14204
HBV
Hepatitis B
Hepatitis B virus
ViralProj15428
HCV
Hepatitis C
Hepatitis C virus
ViralProj15432
HSV1
Herpes simplex 1
Human alphaherpesvirus 1
strain 17
HCMV
Cytomegalovirus
Human betaherpesvirus 5
Merlin
EBV
Epstein-Barr virus
Human gammaherpesvirus 4
ASM240226v1
HIV
HIV-1
Human immunodeficiency virus 1
HXB2
HPV
HPV-16
Human papillomavirus 16
ViralProj15505
RSV
RSV
Human respiratory syncytial virus
ASM281547v1
FluA
Influenza A
Influenza A virus
A/PR/8/1934 (H1N1)
MPXV
Mpox
Monkeypox virus
Zaire-96-I-16
RABV
Rabies virus
Rabies lyssavirus
ViralProj15144
RVA
Rotavirus A
Rotavirus A
ViralMultiSegProj32521
Cov2
SARS-CoV-2
Severe acute respiratory syndrome coronavirus 2
ASM985889v3
Ebo
Ebola virus
Zaire ebolavirus
Mayinga 1976
ZIKV
Zika virus
Zika virus
ViralProj36615
No species match that filter.